Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00959A0A1B0GUT2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 AD001527.2-201ENST00000622994 785 ntBASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 AC073592.5-201ENST00000624854 528 ntBASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 DOC2GP-204ENST00000639052 2548 ntBASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 AC079328.2-201ENST00000561241 3354 ntBASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00959A0A1B0GUT2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 AC092171.3-201ENST00000610122 2651 ntBASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 TUBB8P12-201ENST00000308911 1335 ntBASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 TUBB7P-202ENST00000428444 1305 ntBASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 TUBB8P7-204ENST00000567960 1332 ntBASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00959A0A1B0GUT2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms