Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 TSPY7P-201ENST00000431358 1114 ntBASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 AL136038.4-201ENST00000603606 1261 ntBASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 EGFEM1P-202ENST00000431685 1563 ntBASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV18A0A075B6X5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 HMGA1P5-201ENST00000412453 271 ntBASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 AC098590.1-201ENST00000468126 897 ntBASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 GCSHP2-201ENST00000560971 527 ntBASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 AC109462.3-201ENST00000573934 613 ntBASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 AC068418.2-201ENST00000577309 3703 ntBASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV18A0A075B6X5 AC105917.1-201ENST00000506637 2539 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 AC010460.3-201ENST00000511359 1579 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms