Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.29■□□□□ 0.84
CYP46A1Q9Y6A2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TUBB8P12-201ENST00000308911 1335 ntBASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TUBB7P-202ENST00000428444 1305 ntBASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TUBB8P7-204ENST00000567960 1332 ntBASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 NKAPP1-205ENST00000585790 367 ntBASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CYP46A1Q9Y6A2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 KRT18P31-201ENST00000506277 1292 ntBASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 AC064862.7-201ENST00000604520 867 ntBASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 AL353135.1-201ENST00000606729 504 ntBASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 AL121772.3-201ENST00000610840 674 ntBASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 AL022326.1-202ENST00000641533 845 ntBASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYP46A1Q9Y6A2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CYP46A1Q9Y6A2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.27■□□□□ 0.83
CYP46A1Q9Y6A2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CYP46A1Q9Y6A2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CYP46A1Q9Y6A2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CYP46A1Q9Y6A2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CYP46A1Q9Y6A2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 AL356309.3-201ENST00000624132 1934 ntBASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 AP002414.1-201ENST00000391405 1147 ntBASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 DUX4L17-201ENST00000557360 1267 ntBASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 MTDHP3-201ENST00000594186 672 ntBASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 AL139288.1-201ENST00000623748 933 ntBASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYP46A1Q9Y6A2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms