Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 MIR3652-201ENST00000579335 131 ntBASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA11Q9Y5H2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 ACTG1P4-201ENST00000425123 1122 ntBASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 AC073592.4-201ENST00000623827 446 ntBASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA11Q9Y5H2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 AC079776.2-201ENST00000641154 1609 ntBASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 HCG4P8-203ENST00000443049 980 ntBASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 FOSL1P1-201ENST00000511041 816 ntBASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA11Q9Y5H2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms