Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB11Q9Y5F2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 AC004817.3-201ENST00000602957 2129 ntBASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 AL589182.2-201ENST00000619332 1049 ntBASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 AC134684.3-201ENST00000641758 218 ntBASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB11Q9Y5F2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 AC009947.1-201ENST00000444350 727 ntBASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 AL355385.1-201ENST00000606123 409 ntBASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 AL135999.2-201ENST00000622438 1686 ntBASIC16.77■□□□□ 0.28
PCDHB11Q9Y5F2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB11Q9Y5F2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB11Q9Y5F2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms