Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 AC026396.1-201ENST00000419388 421 ntBASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 LINC00982-205ENST00000420957 435 ntBASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 RPS2P1-201ENST00000434010 821 ntBASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 AP001005.1-201ENST00000571755 1248 ntBASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 PGM5P2-202ENST00000637225 1043 ntBASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PARPBPQ9NWS1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PARPBPQ9NWS1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 AL031284.1-201ENST00000419297 478 ntBASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 AL121894.2-201ENST00000602977 491 ntBASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 MIR1199-201ENST00000621445 119 ntBASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.33■□□□□ 0.04
PARPBPQ9NWS1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.32■□□□□ 0.04
PARPBPQ9NWS1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms