Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
SLC52A1Q9NWF4 FRMD8P1-201ENST00000440433 1524 ntBASIC24.19■■□□□ 1.46
SLC52A1Q9NWF4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC24.19■■□□□ 1.46
SLC52A1Q9NWF4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC52A1Q9NWF4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC52A1Q9NWF4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SLC52A1Q9NWF4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SLC52A1Q9NWF4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 FAM220BP-201ENST00000377689 816 ntBASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 MIR6752-201ENST00000618442 71 ntBASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC52A1Q9NWF4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 PRYP6-201ENST00000514804 343 ntBASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC52A1Q9NWF4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 AC008738.7-201ENST00000609744 511 ntBASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC52A1Q9NWF4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC52A1Q9NWF4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms