Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 SPDYE15P-201ENST00000424157 909 ntBASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 KRT17P6-201ENST00000453795 1220 ntBASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 AC002558.1-201ENST00000488906 803 ntBASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCM2LQ9NUG4 AL513477.1-201ENST00000602865 2407 ntBASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 FAAHP1-202ENST00000446499 1238 ntBASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 UNC93B7-201ENST00000509439 705 ntBASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 AC112698.1-201ENST00000510299 916 ntBASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 AC006538.3-201ENST00000612495 578 ntBASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 AC023511.2-201ENST00000618803 211 ntBASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 MST1L-201ENST00000442552 2185 ntBASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCM2LQ9NUG4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 KRT89P-201ENST00000620027 1478 ntBASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 AL645929.1-201ENST00000420084 975 ntBASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms