Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 AP000867.4-201ENST00000641616 219 ntBASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC52A3Q9NQ40 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 AC013467.2-201ENST00000605472 835 ntBASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC52A3Q9NQ40 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 AL139011.1-202ENST00000642063 584 ntBASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms