Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AL590787.1-201ENST00000568856 1315 ntBASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 DUTP2-201ENST00000519164 463 ntBASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 KRT8P23-201ENST00000560090 1207 ntBASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AC010336.2-201ENST00000564226 506 ntBASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AL645728.2-201ENST00000641974 660 ntBASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 SLC25A6P5-201ENST00000435663 894 ntBASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 AC093677.2-201ENST00000600169 1863 ntBASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 AC018470.1-201ENST00000624790 3129 ntBASIC18.77■□□□□ 0.6
UBE2OQ9C0C9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE2OQ9C0C9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE2OQ9C0C9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE2OQ9C0C9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
UBE2OQ9C0C9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBE2OQ9C0C9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AC129492.6-201ENST00000611383 1305 ntBASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 BICD1-207ENST00000551848 1962 ntBASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms