Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 RN7SL510P-201ENST00000581311 263 ntBASIC15.77■□□□□ 0.12
TRIM2Q9C040 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 AP000867.4-201ENST00000641616 219 ntBASIC15.77■□□□□ 0.12
TRIM2Q9C040 AC106886.4-201ENST00000623557 2502 ntBASIC15.77■□□□□ 0.12
TRIM2Q9C040 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
TRIM2Q9C040 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.77■□□□□ 0.11
TRIM2Q9C040 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRIM2Q9C040 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRIM2Q9C040 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM2Q9C040 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRIM2Q9C040 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.77■□□□□ 0.11
TRIM2Q9C040 AC105020.1-201ENST00000435356 2205 ntBASIC15.76■□□□□ 0.11
TRIM2Q9C040 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 MIR5100-201ENST00000579544 119 ntBASIC15.76■□□□□ 0.11
TRIM2Q9C040 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 AC099336.1-202ENST00000602961 463 ntBASIC15.76■□□□□ 0.11
TRIM2Q9C040 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM2Q9C040 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM2Q9C040 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM2Q9C040 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM2Q9C040 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM2Q9C040 AC005915.1-201ENST00000624912 2018 ntBASIC15.75■□□□□ 0.11
TRIM2Q9C040 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM2Q9C040 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM2Q9C040 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM2Q9C040 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM2Q9C040 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM2Q9C040 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM2Q9C040 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TRIM2Q9C040 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM2Q9C040 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM2Q9C040 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM2Q9C040 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM2Q9C040 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms