Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 POM121L3P-201ENST00000419331 1163 ntBASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 AC018695.7-201ENST00000624587 2492 ntBASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 AL020989.1-201ENST00000422979 469 ntBASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF3BQ9BZI7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 ABCD1P5-201ENST00000445663 754 ntBASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 SIGLEC30P-201ENST00000455569 941 ntBASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 AC097637.2-201ENST00000624096 1997 ntBASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF3BQ9BZI7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms