Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NIFKP9-201ENST00000419265 221 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 KSR1P1-201ENST00000446298 240 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 AC083906.2-201ENST00000511578 360 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MIR6821-201ENST00000617625 74 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 AC130371.2-201ENST00000619443 611 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 AL031985.4-201ENST00000642138 673 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TBC1D3P2-202ENST00000577902 1649 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms