Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 AC023141.5-201ENST00000458585 616 ntBASIC17.77■□□□□ 0.44
LRRC3Q9BY71 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
LRRC3Q9BY71 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
LRRC3Q9BY71 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 AC005412.3-201ENST00000580309 715 ntBASIC17.76■□□□□ 0.43
LRRC3Q9BY71 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC3Q9BY71 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 AL627223.1-201ENST00000416693 442 ntBASIC17.75■□□□□ 0.43
LRRC3Q9BY71 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 TIMM8BP1-201ENST00000452384 211 ntBASIC17.75■□□□□ 0.43
LRRC3Q9BY71 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 FAM86C2P-203ENST00000528684 1004 ntBASIC17.75■□□□□ 0.43
LRRC3Q9BY71 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 AC243562.1-201ENST00000560672 389 ntBASIC17.75■□□□□ 0.43
LRRC3Q9BY71 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LRRC3Q9BY71 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms