Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TUBB8P12-201ENST00000308911 1335 ntBASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TUBB7P-202ENST00000428444 1305 ntBASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TUBB8P7-204ENST00000567960 1332 ntBASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO3Q9BXY4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 SART3-203ENST00000546611 1184 ntBASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RSPO3Q9BXY4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms