Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFAF3Q9BU61 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 HOMER2P1-201ENST00000455653 964 ntBASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 MIR3180-5-201ENST00000583743 153 ntBASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 AC092068.3-201ENST00000587894 2016 ntBASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 AC068587.6-202ENST00000641839 5619 ntBASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 HOXB1-202ENST00000577092 1414 ntBASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFAF3Q9BU61 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 AL023284.2-201ENST00000405850 579 ntBASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 MIR3180-4-201ENST00000582223 153 ntBASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 SNX18-202ENST00000343017 3140 ntBASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms