Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SHANK2-AS3Q9BTD1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC006449.5-201ENST00000610658 2098 ntBASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 PCDHB17P-201ENST00000539533 2393 ntBASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SHANK2-AS3Q9BTD1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 CHCHD2P8-201ENST00000429873 447 ntBASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 DUX4L26-201ENST00000489078 1255 ntBASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SHANK2-AS3Q9BTD1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms