Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.36■□□□□ 0.05
USB1Q9BQ65 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 AL022342.1-201ENST00000400363 863 ntBASIC15.36■□□□□ 0.05
USB1Q9BQ65 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 AP001542.1-201ENST00000591314 200 ntBASIC15.36■□□□□ 0.05
USB1Q9BQ65 LINC00896-202ENST00000609602 2128 ntBASIC15.36■□□□□ 0.05
USB1Q9BQ65 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 AC008735.5-201ENST00000623544 497 ntBASIC15.36■□□□□ 0.05
USB1Q9BQ65 AC117500.6-201ENST00000624871 588 ntBASIC15.36■□□□□ 0.05
USB1Q9BQ65 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
USB1Q9BQ65 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
USB1Q9BQ65 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 FLJ16779-201ENST00000612722 7638 ntBASIC15.35■□□□□ 0.05
USB1Q9BQ65 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 AC134043.2-201ENST00000624206 2238 ntBASIC15.35■□□□□ 0.05
USB1Q9BQ65 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 KLF4P1-201ENST00000412782 1185 ntBASIC15.35■□□□□ 0.05
USB1Q9BQ65 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 SLC25A6P5-201ENST00000435663 894 ntBASIC15.35■□□□□ 0.05
USB1Q9BQ65 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 AC105339.3-201ENST00000560043 636 ntBASIC15.35■□□□□ 0.05
USB1Q9BQ65 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 ZNF259P1-201ENST00000407656 1365 ntBASIC15.35■□□□□ 0.05
USB1Q9BQ65 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.35■□□□□ 0.05
USB1Q9BQ65 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
USB1Q9BQ65 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 AC005104.2-201ENST00000427818 678 ntBASIC15.34■□□□□ 0.05
USB1Q9BQ65 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 PMS2P1-201ENST00000431037 1228 ntBASIC15.34■□□□□ 0.05
USB1Q9BQ65 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 AC025062.2-201ENST00000605477 670 ntBASIC15.34■□□□□ 0.05
USB1Q9BQ65 AC120114.3-201ENST00000611923 658 ntBASIC15.34■□□□□ 0.05
USB1Q9BQ65 MIR1199-201ENST00000621445 119 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms