Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.17■□□□□ 0.02
VRK1Q99986 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.17■□□□□ 0.02
VRK1Q99986 AC073648.2-201ENST00000510116 352 ntBASIC15.17■□□□□ 0.02
VRK1Q99986 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.17■□□□□ 0.02
VRK1Q99986 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.17■□□□□ 0.02
VRK1Q99986 AP001005.1-201ENST00000571755 1248 ntBASIC15.17■□□□□ 0.02
VRK1Q99986 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 AL773604.1-201ENST00000617417 272 ntBASIC15.17■□□□□ 0.02
VRK1Q99986 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK1Q99986 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
VRK1Q99986 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK1Q99986 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VRK1Q99986 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VRK1Q99986 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 AL022342.1-201ENST00000400363 863 ntBASIC15.16■□□□□ 0.02
VRK1Q99986 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 RBM17P3-201ENST00000417687 1192 ntBASIC15.16■□□□□ 0.02
VRK1Q99986 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.16■□□□□ 0.02
VRK1Q99986 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.16■□□□□ 0.02
VRK1Q99986 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 SCARNA2-201ENST00000458748 420 ntBASIC15.16■□□□□ 0.02
VRK1Q99986 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 AC093909.1-201ENST00000504731 1122 ntBASIC15.16■□□□□ 0.02
VRK1Q99986 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 AC106795.1-205ENST00000512851 1056 ntBASIC15.16■□□□□ 0.02
VRK1Q99986 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.16■□□□□ 0.02
VRK1Q99986 AL355877.3-201ENST00000622820 899 ntBASIC15.16■□□□□ 0.02
VRK1Q99986 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
VRK1Q99986 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms