Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMOQ99835 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.87■□□□□ 0.45
SMOQ99835 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.87■□□□□ 0.45
SMOQ99835 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.86■□□□□ 0.45
SMOQ99835 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.86■□□□□ 0.45
SMOQ99835 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.86■□□□□ 0.45
SMOQ99835 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.86■□□□□ 0.45
SMOQ99835 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.86■□□□□ 0.45
SMOQ99835 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 AC010327.4-202ENST00000591484 748 ntBASIC17.86■□□□□ 0.45
SMOQ99835 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.86■□□□□ 0.45
SMOQ99835 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SMOQ99835 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 KRT8P49-201ENST00000604166 1432 ntBASIC17.86■□□□□ 0.45
SMOQ99835 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 SLC22A20-204ENST00000530038 1673 ntBASIC17.86■□□□□ 0.45
SMOQ99835 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
SMOQ99835 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.86■□□□□ 0.45
SMOQ99835 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMOQ99835 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 RPSAP43-201ENST00000402237 625 ntBASIC17.85■□□□□ 0.45
SMOQ99835 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 AC074386.1-202ENST00000463561 864 ntBASIC17.85■□□□□ 0.45
SMOQ99835 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 AC112482.1-201ENST00000492080 688 ntBASIC17.85■□□□□ 0.45
SMOQ99835 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 AC005412.3-201ENST00000580309 715 ntBASIC17.85■□□□□ 0.45
SMOQ99835 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.85■□□□□ 0.45
SMOQ99835 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 MTDHP5-201ENST00000598980 586 ntBASIC17.85■□□□□ 0.45
SMOQ99835 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.85■□□□□ 0.45
SMOQ99835 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMOQ99835 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMOQ99835 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.85■□□□□ 0.45
SMOQ99835 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SMOQ99835 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.84■□□□□ 0.45
SMOQ99835 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMOQ99835 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.84■□□□□ 0.45
SMOQ99835 AL021920.2-201ENST00000624828 1351 ntBASIC17.84■□□□□ 0.45
SMOQ99835 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 UPF3AP3-201ENST00000420996 769 ntBASIC17.84■□□□□ 0.45
SMOQ99835 GPX1P2-201ENST00000429271 606 ntBASIC17.84■□□□□ 0.45
SMOQ99835 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.84■□□□□ 0.45
SMOQ99835 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.84■□□□□ 0.45
SMOQ99835 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.84■□□□□ 0.45
SMOQ99835 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms