Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CPNE1Q99829 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 AP002383.4-201ENST00000442518 975 ntBASIC17.11■□□□□ 0.33
CPNE1Q99829 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CPNE1Q99829 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 AP000867.4-201ENST00000641616 219 ntBASIC17.11■□□□□ 0.33
CPNE1Q99829 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 AL645728.1-201ENST00000366221 2101 ntBASIC17.11■□□□□ 0.33
CPNE1Q99829 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE1Q99829 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE1Q99829 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE1Q99829 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CPNE1Q99829 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE1Q99829 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE1Q99829 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 IGHV3-47-201ENST00000425060 335 ntBASIC17.1■□□□□ 0.33
CPNE1Q99829 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.1■□□□□ 0.33
CPNE1Q99829 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.1■□□□□ 0.33
CPNE1Q99829 AP002414.4-201ENST00000589764 1148 ntBASIC17.1■□□□□ 0.33
CPNE1Q99829 AC114341.1-201ENST00000618070 349 ntBASIC17.1■□□□□ 0.33
CPNE1Q99829 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE1Q99829 HLA-A-202ENST00000376806 1854 ntBASIC17.1■□□□□ 0.33
CPNE1Q99829 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CPNE1Q99829 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 AC006449.5-201ENST00000610658 2098 ntBASIC17.09■□□□□ 0.33
CPNE1Q99829 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.09■□□□□ 0.33
CPNE1Q99829 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE1Q99829 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 SPDYE21P-201ENST00000413323 827 ntBASIC17.09■□□□□ 0.33
CPNE1Q99829 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE1Q99829 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE1Q99829 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 AL049597.2-201ENST00000565575 961 ntBASIC17.09■□□□□ 0.33
CPNE1Q99829 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.09■□□□□ 0.33
CPNE1Q99829 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE1Q99829 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPNE1Q99829 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CPNE1Q99829 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CPNE1Q99829 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPNE1Q99829 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE1Q99829 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CPNE1Q99829 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE1Q99829 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms