Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 CEND1P1-201ENST00000451006 455 ntBASIC16.56■□□□□ 0.24
SLC38A3Q99624 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 SLC25A6P2-201ENST00000497974 877 ntBASIC16.56■□□□□ 0.24
SLC38A3Q99624 YBX1P5-201ENST00000509441 847 ntBASIC16.56■□□□□ 0.24
SLC38A3Q99624 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC38A3Q99624 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC38A3Q99624 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 AP006288.1-201ENST00000446065 395 ntBASIC16.55■□□□□ 0.24
SLC38A3Q99624 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SLC38A3Q99624 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC38A3Q99624 ELL2P1-201ENST00000413990 1906 ntBASIC16.55■□□□□ 0.24
SLC38A3Q99624 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC38A3Q99624 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC38A3Q99624 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC38A3Q99624 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 FAM58CP-201ENST00000435741 640 ntBASIC16.54■□□□□ 0.24
SLC38A3Q99624 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC38A3Q99624 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC38A3Q99624 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC38A3Q99624 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC38A3Q99624 CROCCP1-201ENST00000426910 5675 ntBASIC16.54■□□□□ 0.24
SLC38A3Q99624 AC134043.2-201ENST00000624206 2238 ntBASIC16.54■□□□□ 0.24
SLC38A3Q99624 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC38A3Q99624 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC38A3Q99624 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.53■□□□□ 0.24
SLC38A3Q99624 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC38A3Q99624 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC38A3Q99624 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms