Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EYA3Q99504 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EYA3Q99504 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.65■□□□□ 0.9
EYA3Q99504 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
EYA3Q99504 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EYA3Q99504 RNU1-129P-201ENST00000384064 167 ntBASIC20.65■□□□□ 0.9
EYA3Q99504 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.65■□□□□ 0.9
EYA3Q99504 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.65■□□□□ 0.9
EYA3Q99504 FAM207CP-201ENST00000443486 507 ntBASIC20.65■□□□□ 0.9
EYA3Q99504 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.65■□□□□ 0.9
EYA3Q99504 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EYA3Q99504 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.65■□□□□ 0.9
EYA3Q99504 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.65■□□□□ 0.9
EYA3Q99504 U1.21-201ENST00000580816 167 ntBASIC20.65■□□□□ 0.9
EYA3Q99504 MIR6080-201ENST00000617359 66 ntBASIC20.65■□□□□ 0.9
EYA3Q99504 AL390754.1-201ENST00000619088 582 ntBASIC20.65■□□□□ 0.9
EYA3Q99504 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.65■□□□□ 0.9
EYA3Q99504 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.65■□□□□ 0.9
EYA3Q99504 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EYA3Q99504 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EYA3Q99504 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EYA3Q99504 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EYA3Q99504 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.64■□□□□ 0.9
EYA3Q99504 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EYA3Q99504 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
EYA3Q99504 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.64■□□□□ 0.9
EYA3Q99504 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EYA3Q99504 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.64■□□□□ 0.89
EYA3Q99504 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
EYA3Q99504 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
EYA3Q99504 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.64■□□□□ 0.89
EYA3Q99504 AL512638.1-201ENST00000457493 794 ntBASIC20.64■□□□□ 0.89
EYA3Q99504 AC069120.2-201ENST00000524091 540 ntBASIC20.64■□□□□ 0.89
EYA3Q99504 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 ALG1L8P-201ENST00000533887 760 ntBASIC20.64■□□□□ 0.89
EYA3Q99504 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
EYA3Q99504 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.64■□□□□ 0.89
EYA3Q99504 AC027307.2-201ENST00000591252 911 ntBASIC20.64■□□□□ 0.89
EYA3Q99504 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
EYA3Q99504 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EYA3Q99504 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
EYA3Q99504 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 TOP3BP1-201ENST00000420768 1380 ntBASIC20.63■□□□□ 0.89
EYA3Q99504 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
EYA3Q99504 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.63■□□□□ 0.89
EYA3Q99504 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 UGT1A2P-201ENST00000454886 866 ntBASIC20.63■□□□□ 0.89
EYA3Q99504 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.63■□□□□ 0.89
EYA3Q99504 AP000842.3-202ENST00000569238 1080 ntBASIC20.63■□□□□ 0.89
EYA3Q99504 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.63■□□□□ 0.89
EYA3Q99504 AP001350.2-201ENST00000625104 1094 ntBASIC20.63■□□□□ 0.89
EYA3Q99504 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
EYA3Q99504 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
EYA3Q99504 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms