Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 MTCL1P1-201ENST00000446207 792 ntBASIC13.91□□□□□ -0.18
RAB40CQ96S21 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 AC105917.1-201ENST00000506637 2539 ntBASIC13.91□□□□□ -0.18
RAB40CQ96S21 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 AC010947.1-201ENST00000623454 693 ntBASIC13.9□□□□□ -0.18
RAB40CQ96S21 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 HLA-A-202ENST00000376806 1854 ntBASIC13.9□□□□□ -0.18
RAB40CQ96S21 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40CQ96S21 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40CQ96S21 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40CQ96S21 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40CQ96S21 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40CQ96S21 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40CQ96S21 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40CQ96S21 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms