Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 GPR89P-201ENST00000407924 1495 ntBASIC16.24■□□□□ 0.19
BBS4Q96RK4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.24■□□□□ 0.19
BBS4Q96RK4 KRT18P31-201ENST00000506277 1292 ntBASIC16.24■□□□□ 0.19
BBS4Q96RK4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 AC091304.2-201ENST00000564639 760 ntBASIC16.24■□□□□ 0.19
BBS4Q96RK4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.24■□□□□ 0.19
BBS4Q96RK4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BBS4Q96RK4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
BBS4Q96RK4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.23■□□□□ 0.19
BBS4Q96RK4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.23■□□□□ 0.19
BBS4Q96RK4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.23■□□□□ 0.19
BBS4Q96RK4 LINC01711-201ENST00000598340 967 ntBASIC16.23■□□□□ 0.19
BBS4Q96RK4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 AC073592.4-201ENST00000623827 446 ntBASIC16.23■□□□□ 0.19
BBS4Q96RK4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.23■□□□□ 0.19
BBS4Q96RK4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
BBS4Q96RK4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BBS4Q96RK4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BBS4Q96RK4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.22■□□□□ 0.19
BBS4Q96RK4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.22■□□□□ 0.19
BBS4Q96RK4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BBS4Q96RK4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms