Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 AP002414.1-201ENST00000391405 1147 ntBASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 MTDHP4-201ENST00000600287 670 ntBASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 AC064862.7-201ENST00000604520 867 ntBASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
MS4A4EQ96PG1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MS4A4EQ96PG1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MS4A4EQ96PG1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MS4A4EQ96PG1 AL590787.1-201ENST00000568856 1315 ntBASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 AC139887.3-201ENST00000568585 713 ntBASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MS4A4EQ96PG1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.94■□□□□ 0.14
MS4A4EQ96PG1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms