Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 AC236430.1-201ENST00000402231 743 ntBASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 PMS2P4-201ENST00000412466 1052 ntBASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 BASP1P1-201ENST00000430708 665 ntBASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 ALG1L8P-201ENST00000533887 760 ntBASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 AC140878.1-201ENST00000565277 250 ntBASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 RN7SL204P-201ENST00000582831 262 ntBASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.34■□□□□ 0.37
LRRC3BQ96PB8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC3BQ96PB8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 MIR3909-201ENST00000579518 119 ntBASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 MIR4492-201ENST00000581627 80 ntBASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC3BQ96PB8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC3BQ96PB8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms