Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 KRT8P49-201ENST00000604166 1432 ntBASIC18.09■□□□□ 0.49
CASD1Q96PB1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 MIR661-201ENST00000384842 89 ntBASIC18.09■□□□□ 0.49
CASD1Q96PB1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 UGT1A2P-201ENST00000454886 866 ntBASIC18.09■□□□□ 0.49
CASD1Q96PB1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 AL138918.1-201ENST00000568306 659 ntBASIC18.09■□□□□ 0.49
CASD1Q96PB1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.09■□□□□ 0.49
CASD1Q96PB1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASD1Q96PB1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.08■□□□□ 0.49
CASD1Q96PB1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASD1Q96PB1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASD1Q96PB1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASD1Q96PB1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.08■□□□□ 0.49
CASD1Q96PB1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CASD1Q96PB1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASD1Q96PB1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.08■□□□□ 0.49
CASD1Q96PB1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASD1Q96PB1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CASD1Q96PB1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.08■□□□□ 0.48
CASD1Q96PB1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CASD1Q96PB1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 MIR4492-201ENST00000581627 80 ntBASIC18.08■□□□□ 0.48
CASD1Q96PB1 CYP2A7P1-201ENST00000595391 815 ntBASIC18.08■□□□□ 0.48
CASD1Q96PB1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CASD1Q96PB1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.08■□□□□ 0.48
CASD1Q96PB1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 AL138688.1-201ENST00000624851 1594 ntBASIC18.08■□□□□ 0.48
CASD1Q96PB1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASD1Q96PB1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASD1Q96PB1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASD1Q96PB1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CASD1Q96PB1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 AC236430.1-201ENST00000402231 743 ntBASIC18.07■□□□□ 0.48
CASD1Q96PB1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 TSPY16P-201ENST00000449843 468 ntBASIC18.07■□□□□ 0.48
CASD1Q96PB1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 AC097493.3-201ENST00000509725 367 ntBASIC18.07■□□□□ 0.48
CASD1Q96PB1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 RN7SL204P-201ENST00000582831 262 ntBASIC18.07■□□□□ 0.48
CASD1Q96PB1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASD1Q96PB1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.07■□□□□ 0.48
CASD1Q96PB1 AL158211.3-201ENST00000607385 239 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms