Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.61■□□□□ 0.41
RPRD1AQ96P16 AL591424.1-201ENST00000442569 1213 ntBASIC17.61■□□□□ 0.41
RPRD1AQ96P16 POLD2P1-201ENST00000511220 997 ntBASIC17.61■□□□□ 0.41
RPRD1AQ96P16 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 AC064836.3-201ENST00000607928 673 ntBASIC17.61■□□□□ 0.41
RPRD1AQ96P16 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 AL645608.8-201ENST00000606034 2086 ntBASIC17.6■□□□□ 0.41
RPRD1AQ96P16 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 FAM197Y3-203ENST00000618346 717 ntBASIC17.6■□□□□ 0.41
RPRD1AQ96P16 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPRD1AQ96P16 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.59■□□□□ 0.41
RPRD1AQ96P16 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 KRT18P3-201ENST00000451602 1288 ntBASIC17.59■□□□□ 0.41
RPRD1AQ96P16 SLC25A6P2-201ENST00000497974 877 ntBASIC17.59■□□□□ 0.41
RPRD1AQ96P16 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 RNA5SP416-201ENST00000516838 111 ntBASIC17.59■□□□□ 0.41
RPRD1AQ96P16 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 OR7E47P-204ENST00000575924 449 ntBASIC17.59■□□□□ 0.41
RPRD1AQ96P16 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 AC108860.2-201ENST00000562760 2183 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms