Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PGBD1Q96JS3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PGBD1Q96JS3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 AC078925.2-201ENST00000624013 1973 ntBASIC19.88■□□□□ 0.77
PGBD1Q96JS3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 AP002414.3-201ENST00000589352 1468 ntBASIC19.88■□□□□ 0.77
PGBD1Q96JS3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 SIGLEC30P-201ENST00000455569 941 ntBASIC19.88■□□□□ 0.77
PGBD1Q96JS3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 AC092068.3-201ENST00000587894 2016 ntBASIC19.88■□□□□ 0.77
PGBD1Q96JS3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 AC097637.2-201ENST00000624096 1997 ntBASIC19.88■□□□□ 0.77
PGBD1Q96JS3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 AC092171.3-201ENST00000610122 2651 ntBASIC19.88■□□□□ 0.77
PGBD1Q96JS3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PGBD1Q96JS3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 AL135999.2-201ENST00000622438 1686 ntBASIC19.87■□□□□ 0.77
PGBD1Q96JS3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 AC107918.4-202ENST00000641623 219 ntBASIC19.87■□□□□ 0.77
PGBD1Q96JS3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PGBD1Q96JS3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 BCL2-203ENST00000589955 5011 ntBASIC19.86■□□□□ 0.77
PGBD1Q96JS3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 AP000347.1-202ENST00000435868 847 ntBASIC19.86■□□□□ 0.77
PGBD1Q96JS3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PGBD1Q96JS3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms