Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.34■□□□□ 0.21
ITCHQ96J02 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ITCHQ96J02 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.34■□□□□ 0.21
ITCHQ96J02 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.34■□□□□ 0.21
ITCHQ96J02 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.34■□□□□ 0.21
ITCHQ96J02 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.34■□□□□ 0.21
ITCHQ96J02 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 FRMD8P1-201ENST00000440433 1524 ntBASIC16.34■□□□□ 0.21
ITCHQ96J02 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ITCHQ96J02 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.21
ITCHQ96J02 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ITCHQ96J02 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ITCHQ96J02 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ITCHQ96J02 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ITCHQ96J02 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ITCHQ96J02 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ITCHQ96J02 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.33■□□□□ 0.2
ITCHQ96J02 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.33■□□□□ 0.2
ITCHQ96J02 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.33■□□□□ 0.2
ITCHQ96J02 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.33■□□□□ 0.2
ITCHQ96J02 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.33■□□□□ 0.2
ITCHQ96J02 AC246785.2-201ENST00000432512 513 ntBASIC16.33■□□□□ 0.2
ITCHQ96J02 AC104076.2-201ENST00000448912 469 ntBASIC16.33■□□□□ 0.2
ITCHQ96J02 AC022616.7-201ENST00000525383 220 ntBASIC16.33■□□□□ 0.2
ITCHQ96J02 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.33■□□□□ 0.2
ITCHQ96J02 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.33■□□□□ 0.2
ITCHQ96J02 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 AC011270.2-201ENST00000624293 2550 ntBASIC16.33■□□□□ 0.2
ITCHQ96J02 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ITCHQ96J02 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.33■□□□□ 0.2
ITCHQ96J02 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.33■□□□□ 0.2
ITCHQ96J02 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ITCHQ96J02 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ITCHQ96J02 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ITCHQ96J02 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.33■□□□□ 0.2
ITCHQ96J02 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.33■□□□□ 0.2
ITCHQ96J02 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.33■□□□□ 0.2
ITCHQ96J02 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.33■□□□□ 0.2
ITCHQ96J02 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ITCHQ96J02 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.32■□□□□ 0.2
ITCHQ96J02 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.32■□□□□ 0.2
ITCHQ96J02 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 KLF4P1-201ENST00000412782 1185 ntBASIC16.32■□□□□ 0.2
ITCHQ96J02 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.32■□□□□ 0.2
ITCHQ96J02 VENTXP7-201ENST00000475503 772 ntBASIC16.32■□□□□ 0.2
ITCHQ96J02 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.32■□□□□ 0.2
ITCHQ96J02 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
ITCHQ96J02 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 KRT8P26-201ENST00000534154 1276 ntBASIC16.32■□□□□ 0.2
ITCHQ96J02 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
ITCHQ96J02 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ITCHQ96J02 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms