Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 AC013467.2-201ENST00000605472 835 ntBASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 LAGE3P1-201ENST00000425356 484 ntBASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 AC107918.4-202ENST00000641623 219 ntBASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 AL139011.1-202ENST00000642063 584 ntBASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDLIM5Q96HC4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 AL391256.1-201ENST00000443260 1855 ntBASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 KRT18P56-201ENST00000507275 550 ntBASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 IFNL4P1-201ENST00000607083 540 ntBASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 PCDHA14-201ENST00000506751 2298 ntBASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms