Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 AC107918.2-201ENST00000530817 355 ntBASIC18.49■□□□□ 0.55
PGBD4Q96DM1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD4Q96DM1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 AC004835.2-201ENST00000603762 682 ntBASIC18.48■□□□□ 0.55
PGBD4Q96DM1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 AC016396.2-201ENST00000562575 1417 ntBASIC18.48■□□□□ 0.55
PGBD4Q96DM1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PGBD4Q96DM1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 AC005412.3-201ENST00000580309 715 ntBASIC18.47■□□□□ 0.55
PGBD4Q96DM1 MIR4515-201ENST00000584082 81 ntBASIC18.47■□□□□ 0.55
PGBD4Q96DM1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 AL355385.1-201ENST00000606123 409 ntBASIC18.47■□□□□ 0.55
PGBD4Q96DM1 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms