Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 HLA-J-202ENST00000469281 1241 ntBASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 AC097493.3-201ENST00000509725 367 ntBASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 AC069120.2-201ENST00000524091 540 ntBASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 AC084121.4-201ENST00000641598 221 ntBASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 AF228730.8-201ENST00000642140 221 ntBASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNRNP40Q96DI7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 MIR6080-201ENST00000617359 66 ntBASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRNP40Q96DI7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms