Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 AL596087.1-201ENST00000400979 1969 ntBASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TUBB8P12-201ENST00000308911 1335 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TUBB7P-202ENST00000428444 1305 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TUBB8P7-204ENST00000567960 1332 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 KRT89P-201ENST00000620027 1478 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 CRYGFP-201ENST00000418459 633 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 AC096633.1-201ENST00000422446 749 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 SLC25A1P2-201ENST00000430693 912 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 HLA-J-202ENST00000469281 1241 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 NUDT16P1-203ENST00000513809 620 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 MIR3917-201ENST00000580971 93 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 IKBKGP1-201ENST00000612193 1073 ntBASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L1Q8WWY6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L1Q8WWY6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms