Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 COX5BP2-201ENST00000392354 334 ntBASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 IGHV3-52-201ENST00000519770 353 ntBASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM4Q8WVI0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AC009947.2-201ENST00000444014 672 ntBASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AC010653.2-201ENST00000623505 997 ntBASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM4Q8WVI0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms