Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 HPSE2-203ENST00000370552 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 AL157712.1-201ENST00000620178 2055 ntBASIC10.58□□□□□ -0.72
SVIPQ8NHG7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 LINC02078-201ENST00000592718 4237 ntTSL 2 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 AC243972.2-201ENST00000541653 991 ntBASIC10.58□□□□□ -0.72
SVIPQ8NHG7 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SVIPQ8NHG7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PARP6-202ENST00000287196 2625 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 AC005831.1-201ENST00000624384 1697 ntBASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 AC026904.1-201ENST00000430626 3549 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 LINC00567-201ENST00000569854 3409 ntBASIC10.57□□□□□ -0.72
SVIPQ8NHG7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 Z94160.1-201ENST00000445088 1965 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 AC013268.4-201ENST00000637413 2228 ntBASIC10.57□□□□□ -0.72
SVIPQ8NHG7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SVIPQ8NHG7 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms