Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 AC243591.1-201ENST00000452967 1364 ntBASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TMEM35BQ8NCS4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 NKILA-202ENST00000614771 2598 ntBASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 AL450487.1-201ENST00000426799 995 ntBASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 AC006557.2-201ENST00000592985 1240 ntBASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 AC107918.4-202ENST00000641623 219 ntBASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 TUBB8P12-201ENST00000308911 1335 ntBASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 TUBB7P-202ENST00000428444 1305 ntBASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 TUBB8P7-204ENST00000567960 1332 ntBASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM35BQ8NCS4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 RNPS1P1-201ENST00000507437 918 ntBASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 RN7SL510P-201ENST00000581311 263 ntBASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 TERC-201ENST00000602385 541 ntBASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM35BQ8NCS4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 AC004870.1-201ENST00000315132 882 ntBASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 FAM197Y8-203ENST00000450145 560 ntBASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 OR7E14P-202ENST00000530490 1290 ntBASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 AC011676.5-201ENST00000624864 2660 ntBASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM35BQ8NCS4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms