Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 PCED1CP-201ENST00000419887 785 ntBASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 AC116407.4-201ENST00000623319 1061 ntBASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 GPR89P-201ENST00000407924 1495 ntBASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 AL135999.2-201ENST00000622438 1686 ntBASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 AC103702.1-201ENST00000548801 2630 ntBASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN22Q8N7P3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 AC008741.2-201ENST00000612792 3115 ntBASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 AC003669.1-201ENST00000334569 611 ntBASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 CHCHD2P8-201ENST00000429873 447 ntBASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 AL121672.3-201ENST00000608644 468 ntBASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLDN22Q8N7P3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms