Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC28Q86X40 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC28Q86X40 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC28Q86X40 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.27■□□□□ 0.03
LRRC28Q86X40 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC28Q86X40 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC28Q86X40 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
LRRC28Q86X40 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRC28Q86X40 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 RNF216P1-203ENST00000404404 2427 ntBASIC15.26■□□□□ 0.03
LRRC28Q86X40 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 CHCHD2P8-201ENST00000429873 447 ntBASIC15.26■□□□□ 0.03
LRRC28Q86X40 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 NPAP1P7-201ENST00000613027 823 ntBASIC15.26■□□□□ 0.03
LRRC28Q86X40 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 LINC00167-201ENST00000530583 1419 ntBASIC15.26■□□□□ 0.03
LRRC28Q86X40 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC28Q86X40 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC28Q86X40 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC28Q86X40 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 AC113404.2-201ENST00000507884 177 ntBASIC15.25■□□□□ 0.03
LRRC28Q86X40 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC28Q86X40 AC090616.6-201ENST00000582640 721 ntBASIC15.25■□□□□ 0.03
LRRC28Q86X40 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms