Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF546Q86UE3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 SLC25A1P3-201ENST00000395415 828 ntBASIC14.26□□□□□ -0.13
ZNF546Q86UE3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 AC008040.2-201ENST00000461049 708 ntBASIC14.26□□□□□ -0.13
ZNF546Q86UE3 B3GAT3P1-201ENST00000471720 806 ntBASIC14.26□□□□□ -0.13
ZNF546Q86UE3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 AC124947.2-201ENST00000547118 1133 ntBASIC14.26□□□□□ -0.13
ZNF546Q86UE3 RN7SL471P-201ENST00000580476 299 ntBASIC14.26□□□□□ -0.13
ZNF546Q86UE3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 AC073195.1-201ENST00000607241 877 ntBASIC14.26□□□□□ -0.13
ZNF546Q86UE3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF546Q86UE3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 FSCN1P1-201ENST00000568912 1481 ntBASIC14.25□□□□□ -0.13
ZNF546Q86UE3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF546Q86UE3 AC005104.2-201ENST00000427818 678 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms