Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDB1Q86U70 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LDB1Q86U70 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDB1Q86U70 AL022326.1-202ENST00000641533 845 ntBASIC17.09■□□□□ 0.33
LDB1Q86U70 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.09■□□□□ 0.33
LDB1Q86U70 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LDB1Q86U70 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LDB1Q86U70 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDB1Q86U70 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
LDB1Q86U70 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.09■□□□□ 0.33
LDB1Q86U70 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
LDB1Q86U70 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LDB1Q86U70 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LDB1Q86U70 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LDB1Q86U70 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LDB1Q86U70 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LDB1Q86U70 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
LDB1Q86U70 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LDB1Q86U70 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LDB1Q86U70 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LDB1Q86U70 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.08■□□□□ 0.32
LDB1Q86U70 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LDB1Q86U70 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
LDB1Q86U70 DUSP5P1-201ENST00000441325 1139 ntBASIC17.08■□□□□ 0.32
LDB1Q86U70 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LDB1Q86U70 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.08■□□□□ 0.32
LDB1Q86U70 AL139288.1-201ENST00000623748 933 ntBASIC17.08■□□□□ 0.32
LDB1Q86U70 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.08■□□□□ 0.32
LDB1Q86U70 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.08■□□□□ 0.32
LDB1Q86U70 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDB1Q86U70 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LDB1Q86U70 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
LDB1Q86U70 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.07■□□□□ 0.32
LDB1Q86U70 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.07■□□□□ 0.32
LDB1Q86U70 PRYP5-201ENST00000451909 266 ntBASIC17.07■□□□□ 0.32
LDB1Q86U70 SAPCD2P3-201ENST00000455031 850 ntBASIC17.07■□□□□ 0.32
LDB1Q86U70 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
LDB1Q86U70 AC124947.2-201ENST00000547118 1133 ntBASIC17.07■□□□□ 0.32
LDB1Q86U70 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.07■□□□□ 0.32
LDB1Q86U70 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LDB1Q86U70 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LDB1Q86U70 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 AC078925.2-201ENST00000624013 1973 ntBASIC17.07■□□□□ 0.32
LDB1Q86U70 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.07■□□□□ 0.32
LDB1Q86U70 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 PCDHB17P-201ENST00000539533 2393 ntBASIC17.07■□□□□ 0.32
LDB1Q86U70 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.07■□□□□ 0.32
LDB1Q86U70 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDB1Q86U70 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB1Q86U70 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LDB1Q86U70 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LDB1Q86U70 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB1Q86U70 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LDB1Q86U70 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.06■□□□□ 0.32
LDB1Q86U70 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.06■□□□□ 0.32
LDB1Q86U70 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.06■□□□□ 0.32
LDB1Q86U70 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LDB1Q86U70 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.06■□□□□ 0.32
LDB1Q86U70 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LDB1Q86U70 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.06■□□□□ 0.32
LDB1Q86U70 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDB1Q86U70 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms