Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP4Q6PIL6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP4Q6PIL6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP4Q6PIL6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
KCNIP4Q6PIL6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
KCNIP4Q6PIL6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 NBPF21P-201ENST00000425093 1451 ntBASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AC087386.2-201ENST00000623212 4637 ntBASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AC239809.2-201ENST00000415381 517 ntBASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AC026366.1-201ENST00000488803 879 ntBASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 AC092364.2-201ENST00000596710 2692 ntBASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KCNIP4Q6PIL6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 AC006058.4-201ENST00000624016 1670 ntBASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 KRT18P6-201ENST00000555540 1265 ntBASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP4Q6PIL6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms