Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 KRASP1-201ENST00000407852 552 ntBASIC12.96□□□□□ -0.33
MRPL54Q6P161 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 AC083880.1-201ENST00000608266 535 ntBASIC12.96□□□□□ -0.33
MRPL54Q6P161 MIR6821-201ENST00000617625 74 ntBASIC12.96□□□□□ -0.33
MRPL54Q6P161 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 AC073111.5-205ENST00000641717 521 ntBASIC12.96□□□□□ -0.33
MRPL54Q6P161 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
MRPL54Q6P161 PCDHA3-202ENST00000532566 4594 ntBASIC12.96□□□□□ -0.33
MRPL54Q6P161 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MRPL54Q6P161 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MRPL54Q6P161 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.96□□□□□ -0.34
MRPL54Q6P161 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
MRPL54Q6P161 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.96□□□□□ -0.34
MRPL54Q6P161 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
MRPL54Q6P161 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.96□□□□□ -0.34
MRPL54Q6P161 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
MRPL54Q6P161 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
MRPL54Q6P161 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
MRPL54Q6P161 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
MRPL54Q6P161 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MRPL54Q6P161 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
MRPL54Q6P161 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.96□□□□□ -0.34
MRPL54Q6P161 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MRPL54Q6P161 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 SLC25A1P3-201ENST00000395415 828 ntBASIC12.95□□□□□ -0.34
MRPL54Q6P161 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 AC083906.2-201ENST00000511578 360 ntBASIC12.95□□□□□ -0.34
MRPL54Q6P161 AC130371.2-201ENST00000619443 611 ntBASIC12.95□□□□□ -0.34
MRPL54Q6P161 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.95□□□□□ -0.34
MRPL54Q6P161 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL54Q6P161 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms