Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 AL031284.1-201ENST00000419297 478 ntBASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 AC105339.3-201ENST00000560043 636 ntBASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 PI4KAP1-204ENST00000612579 1703 ntBASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN20Q4JDL3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 AC087163.2-201ENST00000457299 853 ntBASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 AL356488.2-201ENST00000602755 427 ntBASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN20Q4JDL3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 FLJ38576-201ENST00000623820 2459 ntBASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN20Q4JDL3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN20Q4JDL3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN20Q4JDL3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN20Q4JDL3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms