Protein–RNA interactions for Protein: Q16526

CRY1, Cryptochrome-1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRY1Q16526 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.53■□□□□ 0.4
CRY1Q16526 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.53■□□□□ 0.4
CRY1Q16526 ACTG1P14-201ENST00000446382 1122 ntBASIC17.53■□□□□ 0.4
CRY1Q16526 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 AC074386.1-202ENST00000463561 864 ntBASIC17.53■□□□□ 0.4
CRY1Q16526 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.53■□□□□ 0.4
CRY1Q16526 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.53■□□□□ 0.4
CRY1Q16526 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
CRY1Q16526 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.53■□□□□ 0.4
CRY1Q16526 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.53■□□□□ 0.4
CRY1Q16526 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.53■□□□□ 0.4
CRY1Q16526 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CRY1Q16526 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.53■□□□□ 0.4
CRY1Q16526 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.53■□□□□ 0.4
CRY1Q16526 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRY1Q16526 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.52■□□□□ 0.4
CRY1Q16526 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CRY1Q16526 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CRY1Q16526 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.52■□□□□ 0.4
CRY1Q16526 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRY1Q16526 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.52■□□□□ 0.4
CRY1Q16526 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CRY1Q16526 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.52■□□□□ 0.4
CRY1Q16526 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.52■□□□□ 0.4
CRY1Q16526 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.52■□□□□ 0.4
CRY1Q16526 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.52■□□□□ 0.4
CRY1Q16526 AC023141.13-201ENST00000604991 943 ntBASIC17.52■□□□□ 0.4
CRY1Q16526 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CRY1Q16526 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.52■□□□□ 0.4
CRY1Q16526 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.52■□□□□ 0.4
CRY1Q16526 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.39
CRY1Q16526 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CRY1Q16526 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRY1Q16526 PI4KAP1-204ENST00000612579 1703 ntBASIC17.52■□□□□ 0.39
CRY1Q16526 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRY1Q16526 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CRY1Q16526 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRY1Q16526 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
CRY1Q16526 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CRY1Q16526 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CRY1Q16526 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 FAM58CP-201ENST00000435741 640 ntBASIC17.51■□□□□ 0.39
CRY1Q16526 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.51■□□□□ 0.39
CRY1Q16526 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.51■□□□□ 0.39
CRY1Q16526 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.51■□□□□ 0.39
CRY1Q16526 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CRY1Q16526 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRY1Q16526 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRY1Q16526 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.5■□□□□ 0.39
CRY1Q16526 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRY1Q16526 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CRY1Q16526 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.5■□□□□ 0.39
CRY1Q16526 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CRY1Q16526 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CRY1Q16526 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRY1Q16526 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.5■□□□□ 0.39
CRY1Q16526 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.5■□□□□ 0.39
CRY1Q16526 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRY1Q16526 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRY1Q16526 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.5■□□□□ 0.39
CRY1Q16526 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
CRY1Q16526 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.5■□□□□ 0.39
CRY1Q16526 ACTG1P4-201ENST00000425123 1122 ntBASIC17.5■□□□□ 0.39
CRY1Q16526 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms