Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.96□□□□□ -0.17
LMO4P61968 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.96□□□□□ -0.17
LMO4P61968 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.96□□□□□ -0.17
LMO4P61968 U1.21-201ENST00000580816 167 ntBASIC13.96□□□□□ -0.17
LMO4P61968 MPDU1-223ENST00000582151 728 ntBASIC13.96□□□□□ -0.17
LMO4P61968 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.96□□□□□ -0.17
LMO4P61968 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO4P61968 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.96□□□□□ -0.17
LMO4P61968 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
LMO4P61968 KRT8P49-201ENST00000604166 1432 ntBASIC13.96□□□□□ -0.18
LMO4P61968 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LMO4P61968 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LMO4P61968 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LMO4P61968 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.96□□□□□ -0.18
LMO4P61968 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LMO4P61968 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LMO4P61968 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LMO4P61968 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LMO4P61968 AC131009.4-201ENST00000624048 1740 ntBASIC13.95□□□□□ -0.18
LMO4P61968 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
LMO4P61968 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO4P61968 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO4P61968 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO4P61968 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.95□□□□□ -0.18
LMO4P61968 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 MIR770-201ENST00000390219 98 ntBASIC13.95□□□□□ -0.18
LMO4P61968 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.95□□□□□ -0.18
LMO4P61968 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 FAM58DP-201ENST00000428076 619 ntBASIC13.95□□□□□ -0.18
LMO4P61968 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.95□□□□□ -0.18
LMO4P61968 SPCS2P4-201ENST00000436160 681 ntBASIC13.95□□□□□ -0.18
LMO4P61968 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO4P61968 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LMO4P61968 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.95□□□□□ -0.18
LMO4P61968 LINC01225-203ENST00000563550 1244 ntBASIC13.95□□□□□ -0.18
LMO4P61968 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.95□□□□□ -0.18
LMO4P61968 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.95□□□□□ -0.18
LMO4P61968 AL031055.1-201ENST00000606362 631 ntBASIC13.95□□□□□ -0.18
LMO4P61968 AP001350.2-201ENST00000625104 1094 ntBASIC13.95□□□□□ -0.18
LMO4P61968 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.95□□□□□ -0.18
LMO4P61968 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LMO4P61968 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO4P61968 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LMO4P61968 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO4P61968 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LMO4P61968 AC007613.1-201ENST00000572811 2597 ntBASIC13.94□□□□□ -0.18
LMO4P61968 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO4P61968 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.94□□□□□ -0.18
LMO4P61968 WASH6P-202ENST00000359512 1437 ntBASIC13.94□□□□□ -0.18
LMO4P61968 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO4P61968 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LMO4P61968 PMS2P4-201ENST00000412466 1052 ntBASIC13.94□□□□□ -0.18
LMO4P61968 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.94□□□□□ -0.18
LMO4P61968 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.94□□□□□ -0.18
LMO4P61968 AC069335.1-201ENST00000489972 472 ntBASIC13.94□□□□□ -0.18
LMO4P61968 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms