Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 AC036111.1-201ENST00000533973 1582 ntBASIC12.06□□□□□ -0.48
CKS1BP61024 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.06□□□□□ -0.48
CKS1BP61024 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.06□□□□□ -0.48
CKS1BP61024 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 CD177P1-201ENST00000606252 935 ntBASIC12.06□□□□□ -0.48
CKS1BP61024 AL359183.1-201ENST00000623796 2132 ntBASIC12.06□□□□□ -0.48
CKS1BP61024 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS1BP61024 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS1BP61024 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS1BP61024 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 HOXB1-202ENST00000577092 1414 ntBASIC12.05□□□□□ -0.48
CKS1BP61024 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 AC026691.1-201ENST00000602502 2017 ntBASIC12.05□□□□□ -0.48
CKS1BP61024 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 ID1-201ENST00000376105 1233 ntBASIC12.05□□□□□ -0.48
CKS1BP61024 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS1BP61024 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 CRYGFP-201ENST00000418459 633 ntBASIC12.05□□□□□ -0.48
CKS1BP61024 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.05□□□□□ -0.48
CKS1BP61024 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS1BP61024 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.05□□□□□ -0.48
CKS1BP61024 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.05□□□□□ -0.48
CKS1BP61024 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms