Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERVFC1-1P60608 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 CICP13-201ENST00000422015 2789 ntBASIC13.35□□□□□ -0.27
ERVFC1-1P60608 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 AL135905.2-201ENST00000584934 1404 ntBASIC13.35□□□□□ -0.27
ERVFC1-1P60608 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERVFC1-1P60608 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 FAM207BP-201ENST00000447172 505 ntBASIC13.34□□□□□ -0.27
ERVFC1-1P60608 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 AL023875.1-201ENST00000640777 796 ntBASIC13.34□□□□□ -0.27
ERVFC1-1P60608 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ERVFC1-1P60608 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms