Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM11AP58511 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.8■□□□□ 0.12
SMIM11AP58511 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
SMIM11AP58511 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.8■□□□□ 0.12
SMIM11AP58511 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM11AP58511 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM11AP58511 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM11AP58511 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11AP58511 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.79■□□□□ 0.12
SMIM11AP58511 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
SMIM11AP58511 TSPY22P-201ENST00000427496 604 ntBASIC15.79■□□□□ 0.12
SMIM11AP58511 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.79■□□□□ 0.12
SMIM11AP58511 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.79■□□□□ 0.12
SMIM11AP58511 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 AL592071.1-201ENST00000611956 408 ntBASIC15.79■□□□□ 0.12
SMIM11AP58511 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SMIM11AP58511 AC133561.5-201ENST00000635547 218 ntBASIC15.79■□□□□ 0.12
SMIM11AP58511 AC097493.4-201ENST00000641197 219 ntBASIC15.79■□□□□ 0.12
SMIM11AP58511 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM11AP58511 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM11AP58511 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM11AP58511 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SMIM11AP58511 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 AC006449.5-201ENST00000610658 2098 ntBASIC15.79■□□□□ 0.12
SMIM11AP58511 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11AP58511 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 AC063926.3-201ENST00000624734 5658 ntBASIC15.78■□□□□ 0.12
SMIM11AP58511 AC068587.6-202ENST00000641839 5619 ntBASIC15.78■□□□□ 0.12
SMIM11AP58511 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SMIM11AP58511 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SMIM11AP58511 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SMIM11AP58511 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.78■□□□□ 0.12
SMIM11AP58511 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.78■□□□□ 0.12
SMIM11AP58511 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.78■□□□□ 0.12
SMIM11AP58511 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 IGHV3-41-201ENST00000613121 348 ntBASIC15.78■□□□□ 0.12
SMIM11AP58511 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.78■□□□□ 0.12
SMIM11AP58511 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM11AP58511 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM11AP58511 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11AP58511 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM11AP58511 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM11AP58511 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMIM11AP58511 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms